出現紀錄

Actualización de la Colección de Microorganismos de importancia acuática

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說明

La colección CAIM ya gozó de un proyecto de computarización por parte de la CONABIO (CC007). Durante este proyecto se computarizó la Colección, pero varias de las cepas (261) quedaron incompletas en su identificación. De las 1813 cepas (registros) faltan por identificar 210 (11.6 %) y otros 51 sólo están a nivel de género; además se han adquirido varios nuevos ejemplares. Para poder llevar a cabo la actualización de la base de datos (BIOTICA), uno de los objetivos que no se pudo satisfacer plenamente en la propuesta anterior, es necesario identificar esas cepas. Para cumplir con este objetivo, en la presenta propuesta se realizarán secuenciaciones de genes útiles ("housekeeping") para poder llegar a una identificación correcta de las cepas bacterianas faltantes. Debido a que éstos genes ya se encuentran secuenciados y disponibles en bases de datos públicas (GenBank), los resultados que se ajusten con una similitud muy elevada (superior al 97-98% para el caso del 16S rARN, por ejemplo), será el criterio para identificar la cepa como perteneciente a esa especie. En caso de que el índice de similitud sea menor, se catalogará como potencial nueva especie y sujeta a posterior análisis. Con estos datos, se actualizará la base de datos para reflejar estas nuevas determinaciones y adicionar las bacterias que se han adquirido recientemente.

Reino: 1 Filo: 5 Clase: 4 Orden: 14 Familia: 22 Género: 39 Especie: 120 Epitetoinfraespecifico: 4

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如何引用

研究者應依照以下指示引用此資源。:

'Gómez-Gil B. 2013. Actualización de la Colección de Microorganismos de Importancia Acuática (CAIM). Colección CAIM. Unidad Mazatlán. Centro de Investigación en Alimentación y Desarrollo A. C. Bases de datos SNIB-CONABIO, proyectos HA013 y CC007. México, D. F.'

權利

研究者應尊重以下權利聲明。:

此資料的發布者及權利單位為 Comisión nacional para el conocimiento y uso de la biodiversidad。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF 註冊

此資源已向GBIF註冊，並指定以下之GBIF UUID: bc9f6237-f373-493a-a783-11b0c5eca844。  Comisión nacional para el conocimiento y uso de la biodiversidad 發佈此資源，並經由Biodiversity Information System of Mexico同意向GBIF註冊成為資料發佈者。

關鍵字

Occurrence; Bacterias; Occurrence

外部資料

此資源尚有其他格式可用

SNIB-HA013-CSV.zip http://www.snib.mx/proyectos/HA013/SNIB-HA013-CSV.zip UTF-8 CSV
SNIB-HA013-BD.zip http://www.snib.mx/proyectos/HA013/SNIB-HA013-BD.zip UTF-8 MDB MicrosoftAccess2007

聯絡資訊

Bruno Gómez Gil Rodríguez Sala
  • 出處
Responsable
Centro de Investigación en Alimentación y Desarrollo ACCoordinación de Acuicultura y Manejo Ambiental (Mazatlán, Sinaloa)
Av Sábalo Cerritos s/n Estero del Yugo
82100 Mazatlán
Sinaloa
MX
Tel 01(669) 989 8700 xt 245 o 221
CONABIO Comisión nacional para el conocimiento y uso de la biodiversidad
  • 元數據提供者
Dirección General de Sistemas
Comisión Nacional para el Conocimiento y Uso de la Biodiversidad
Liga Periférico-Insurgentes Sur No. 4903, Col. Parques del Pedregal
14010 MÉXICO
Tlalpan
MX
50045000
https://www.gob.mx/conabio
Patricia Ramos Rivera
  • 連絡人
Dirección General de Sistemas
Comisión Nacional para el Conocimiento y Uso de la Biodiversidad
Liga Periférico-Insurgentes Sur No. 4903, Col. Parques del Pedregal
14010 México
Tlalpan
MX
50045000
https://www.gob.mx/conabio

地理涵蓋範圍

País: COLOMBIA País: ESTADOS UNIDOS DE AMERICA (CALIFORNIA, CONNECTICUT, FLORIDA, GEORGIA, MARYLAND, MASSACHUSETTS, NEW YORK, NORTH CAROLINA, OHIO, OREGON, SOUTH CAROLINA, TEXAS, VIRGINIA, WASHINGTON) País: GUATEMALA (RETALHULEU) País: MEXICO (BAJA CALIFORNIA, BAJA CALIFORNIA SUR, COLIMA, HIDALGO, NAYARIT, SINALOA, SONORA, VERACRUZ DE IGNACIO DE LA LLAVE)

界定座標範圍 緯度南界 經度西界 [14.279, -117.255], 緯度北界 經度東界 [32.867, -91.892]

分類群涵蓋範圍

Reino: Prokaryotae Filo: Proteobacteria, Firmicutes, Bacteroidetes, Tenericutes, Actinobacteria Clase: Gammaproteobacteria, Bacilli, Alphaproteobacteria, Flavobacteriia Orden: Vibrionales, Alteromonadales, Bacillales, Lactobacillales, Pseudomonadales, Enterobacteriales, Aeromonadales, Rhizobiales, Oceanospirillales, Flavobacteriales, Caulobacterales, Entomoplasmatales, Rhodobacterales, Actinomycetales Familia: Vibrionaceae, Bacillaceae, Alteromonadaceae, Staphylococcaceae, Shewanellaceae, Streptococcaceae, Moraxellaceae, Enterobacteriaceae, Enterococcaceae, Pseudoalteromonadaceae, Pseudomonadaceae, Aeromonadaceae, Brucellaceae, Oceanospirillaceae, Flavobacteriaceae, Halomonadaceae, Alcanivoracaceae, Caulobacteraceae, Micrococcaceae, Spiroplasmataceae, Rhodobacteraceae, Microbacteriaceae

Kingdom Prokaryotae
Phylum Proteobacteria, Firmicutes, Bacteroidetes, Tenericutes, Actinobacteria
Class Gammaproteobacteria, Bacilli, Alphaproteobacteria, Flavobacteriia
Order Vibrionales, Alteromonadales, Bacillales, Lactobacillales, Pseudomonadales, Enterobacteriales, Aeromonadales, Rhizobiales, Oceanospirillales, Flavobacteriales, Caulobacterales, Entomoplasmatales, Rhodobacterales, Actinomycetales
Family Vibrionaceae, Bacillaceae, Alteromonadaceae, Staphylococcaceae, Shewanellaceae, Streptococcaceae, Moraxellaceae, Enterobacteriaceae, Enterococcaceae, Pseudoalteromonadaceae, Pseudomonadaceae, Aeromonadaceae, Brucellaceae, Oceanospirillaceae, Flavobacteriaceae, Halomonadaceae, Alcanivoracaceae, Caulobacteraceae, Micrococcaceae, Spiroplasmataceae, Rhodobacteraceae, Microbacteriaceae
Genus Vibrio, Bacillus, Marinobacter, Photobacterium, Staphylococcus, Oceanobacillus, Shewanella, Streptococcus, Listonella, Psychrobacter, Escherichia, Exiguobacterium, Enterococcus, Alteromonas, Pseudoalteromonas, Pseudomonas, Grimontia, Aeromonas, Pantoea, Agarivorans, Ochrobactrum, Marinomonas, Acinetobacter, Tenacibaculum, Enterobacter, Halomonas, Aliivibrio, Alcanivorax, Brevundimonas, Vagococcus, Micrococcus, Spiroplasma, Yersinia, Enterovibrio, Roseobacter, Salmonella, Edwardsiella, Microbacterium, Salinivibrio
Species Vibrio fortis, Vibrio alginolyticus, Vibrio harveyi, Bacillus safensis, Vibrio parahaemolyticus, Vibrio ponticus, Vibrio campbellii, Vibrio mediterranei, Vibrio rotiferianus, Staphylococcus saprophyticus, Oceanobacillus sojae, Vibrio chagasii, Streptococcus iniae, Vibrio owensii, Vibrio crassostreae, Photobacterium damselae, Vibrio inusitatus, Listonella pelagia, Vibrio azureus, Vibrio cyclitrophicus, Vibrio coralliilyticus, Vibrio brasiliensis, Psychrobacter maritimus, Shewanella baltica, Vibrio communis, Photobacterium leiognathi, Bacillus tequilensis, Vibrio orientalis, Vibrio natriegens, Bacillus aryabhattai, Psychrobacter marincola, Photobacterium swingsii, Vibrio navarrensis, Vibrio proteolyticus, Vibrio splendidus, Vibrio kanaloae, Vibrio xuii, Escherichia coli, Vibrio ichthyoenteri, Bacillus infantis, Vibrio gigantis, Vibrio tubiashii, Shewanella xiamenensis, Oceanobacillus profundus, Exiguobacterium profundum, Vibrio sinaloensis, Staphylococcus gallinarum, Enterococcus hirae, Staphylococcus xylosus, Staphylococcus sciuri, Exiguobacterium mexicanum, Bacillus thioparans, Shewanella haliotis, Vibrio rumoiensis, Alteromonas macleodii, Pseudoalteromonas spongiae, Vibrio alfacsensis, Photobacterium indicum, Vibrio halioticoli, Vibrio cholerae, Pseudomonas beteli, Vibrio artabrorum, Vibrio vulnificus, Grimontia hollisae, Pseudomonas otitidis, Vibrio hepatarius, Vibrio neptunius, Staphylococcus epidermidis, Pseudomonas aeruginosa, Aeromonas hydrophila, Pantoea dispersa, Vibrio mimicus, Agarivorans albus, Ochrobactrum lupini, Vibrio nereis, Marinomonas communis, Vibrio fluvialis, Vibrio ordalii, Pseudomonas taiwanensis, Staphylococcus arlettae, Listonella anguillarum, Acinetobacter baumannii, Photobacterium lutimaris, Aeromonas punctata, Pseudoalteromonas piscicida, Pseudoalteromonas prydzensis, Tenacibaculum mesophilum, Enterobacter cloacae, Halomonas alimentaria, Bacillus circulans, Vibrio cincinnatiensis, Shewanella loihica, Aliivibrio fischeri, Alcanivorax dieselolei, Bacillus cereus, Photobacterium gaetbulicola, Photobacterium jeanii, Acinetobacter schindleri, Brevundimonas terrae, Enterococcus gallinarum, Vagococcus lutrae, Micrococcus yunnanesis, Vibrio diabolicus, Aliivibrio logei, Spiroplasma penaei, Enterobacter hormaechei, Yersinia enterocolitica, Vibrio aestuarianus, Enterovibrio nigricans, Vibrio gazogenes, Vibrio pomeroyi, Vibrio rarus, Enterovibrio norvegicus, Edwardsiella tarda, Aeromonas veronii, Aeromonas jandaei, Pseudomonas anguilliseptica, Microbacterium paraoxydans, Pseudomonas mosselii, Photobacterium angustum
Infraspecificname Photobacterium damselae subsp. damselae, Aeromonas hydrophila subsp. hydrophila, Salmonella enterica subsp. enterica, Salinivibrio costicola subsp. vallismortis

時間涵蓋範圍

起始日期 / 結束日期 1964-09-08 / 2011-02-17

計畫資料

La colección CAIM ya gozó de un proyecto de computarización por parte de la CONABIO (CC007). Durante este proyecto se computarizó la Colección, pero varias de las cepas (261) quedaron incompletas en su identificación. De las 1813 cepas (registros) faltan por identificar 210 (11.6 %) y otros 51 sólo están a nivel de género; además se han adquirido varios nuevos ejemplares. Para poder llevar a cabo la actualización de la base de datos (BIOTICA), uno de los objetivos que no se pudo satisfacer plenamente en la propuesta anterior, es necesario identificar esas cepas. Para cumplir con este objetivo, en la presenta propuesta se realizarán secuenciaciones de genes útiles ("housekeeping") para poder llegar a una identificación correcta de las cepas bacterianas faltantes. Debido a que éstos genes ya se encuentran secuenciados y disponibles en bases de datos públicas (GenBank), los resultados que se ajusten con una similitud muy elevada (superior al 97-98% para el caso del 16S rARN, por ejemplo), será el criterio para identificar la cepa como perteneciente a esa especie. En caso de que el índice de similitud sea menor, se catalogará como potencial nueva especie y sujeta a posterior análisis. Con estos datos, se actualizará la base de datos para reflejar estas nuevas determinaciones y adicionar las bacterias que se han adquirido recientemente.

計畫名稱 Actualización de la Colección de Microorganismos de importancia acuática
辨識碼 SNIB-HA013-HA0131301F_corregida-ND
經費來源 Comisión Nacional para el Conocimiento y Uso de la Biodiversidad (CONABIO)
研究區域描述 Bacterias bacterias (gram-negativas) bacterias (gram-positivas) endobacteria; bacterias (gram-positivas) enterobacteria; bacterias (gram-negativas) fotosintéticas no patógenas no patógenas y patógenas patógenas

參與計畫的人員:

Bruno Gómez Gil Rodríguez Sala
  • Content Provider

收藏資料

蒐藏名稱 Colección de Microorganismos de Importancia Acuática;CAIM;Centro de Investigación en Alimentación y Desarrollo A. C.;CIAD
蒐藏編號 SNIB-HA013-HA0131301F_corregida-ND
上層採集品識別碼 NO APLICA
標本保存方法 Deep frozen
管理單位 在...之間 1 和 13 Ejemplar

引用文獻

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