| Miconia rufescens (Aubl.) DC., 1828 |
| Miconia rzedowskii de Santiago, 2012 |
| Miconia saxicola Brandegee, 1905 |
| Miconia schippii Standl., 1930 |
| Miconia schlechtendalii Cogn., 1891 |
| Miconia schlimii Triana, 1872 |
| Miconia scopulina (Brandegee) Michelang., 2018 |
| Miconia scorpioides (Schltdl. & Cham.) Naudin, 1851 |
| Miconia secunmexicana Ocampo & Almeda, 2018 |
| Miconia sericea (D. Don) Michelang., 2018 |
| Miconia serrulata (DC.) Naudin, 1850 |
| Miconia silvestris Gleason, 1937 |
| Miconia smaragdina Naudin, 1850 |
| Miconia splendens (Sw.) Griseb., 1860 |
| Miconia stenostachya DC., 1828 |
| Miconia stephananthera Ule, 1915 |
| Miconia subhirsuta (DC.) M. Gómez, 1894 |
| Miconia submontana (Rose ex Gleason) Michelang., 2018 |
| Miconia subseriata (Naudin) R. Goldenb. & Michelang., 2018 |
| Miconia sulcicaulis (Poepp. ex Naudin) Ocampo & Almeda, 2018 |