| Flavopunctelia darrowii (J.W. Thomson) Hale, 1984 |
| Flavopunctelia flaventior (Stirt.) Hale, 1984 |
| Flavopunctelia praesignis (Nyl.) Hale, 1984 |
| Flavopunctelia soredica (Nyl.) Hale, 1984 |
| Hypogymnia (Nyl.) Nyl., 1896 |
| Hypogymnia austerodes (Nyl.) Räsänen, 1943 |
| Hypogymnia bitteri (Lynge) Ahti, 1964 |
| Hypogymnia enteromorpha (Ach.) Nyl., 1900 |
| Hypogymnia enteromorphoides Elix, 1980 |
| Hypogymnia guadalupensis McCune, 2002 |
| Hypogymnia imshaugii Krog, 1968 |
| Hypogymnia physodes (L.) Nyl., 1896 |
| Hypogymnia schizidiata McCune, 2002 |
| Hypogymnia tubulosa (Schaer.) Hav., 1918 |
| Hypogymnia vittata (Ach.) Parrique, 1898 |
| Hypotrachyna (Vain.) Hale, 1974 |
| Hypotrachyna adaffinis Sipman, 1992 |
| Hypotrachyna arsenei (Hale & M. Wirth) Divakar, A. Crespo, Sipman, Elix & Lumbsch, 2013 |
| Hypotrachyna bogotensis (Vain.) Hale, 1975 |
| Hypotrachyna brevirhiza (Kurok.) Hale, 1975 |