| Eunotia denticulata (Bréb. ex Kütz.) Rabenhorst, 1864 |
| Eunotia diadema Ehrenb., 1837 |
| Eunotia didyma Grunow, 1881 |
| Eunotia diodon Ehrenb., 1837 |
| Eunotia eruca (Ehrenb.) Brightwell, 1859 |
| Eunotia exigua (Bréb. ex Kütz.) Rabenhorst, 1864 |
| Eunotia faba Ehrenb., 1837 |
| Eunotia flexuosa (Bréb. ex Kütz.) Kütz., 1849 |
| Eunotia formica Ehrenb., 1843 |
| Eunotia gibberula Ehrenb., 1843 |
| Eunotia glacialis Meister, 1912 |
| Eunotia gracilis W. Sm., 1953 |
| Eunotia groenlandica (Grunow) Norpel-Schempp & Lange-Bert., 1996 |
| Eunotia hebridica Ake Berg, 1939 |
| Eunotia implicata Nörpel, Lange-Bert. & Alles, 1991 |
| Eunotia incisa W. Sm. ex W. Gregory, 1854 |
| Eunotia indica Grunow, 1865 |
| Eunotia intermedia (Krasske) Nörpel & Lange-Bert., 1993 |
| Eunotia kareniae Metzeltin & Lange-Bert., 2007 |
| Eunotia kruegeri Lange-Bert., 2004 |