| Peromyscus ensinki Bradley, Ordóñez-Garza, Thompson, Wright, Ceballos, Kilpatrick, & Schmidly, 2021 |
| Peromyscus eremicus (Baird, 1858) |
| Peromyscus eremicus subsp. alcorni S. Anderson, 1972 |
| Peromyscus eremicus subsp. anthonyi (Merriam, 1887) |
| Peromyscus eremicus subsp. arenarius Mearns, 1896 |
| Peromyscus eremicus subsp. avius Osgood, 1909 |
| Peromyscus eremicus subsp. carmeni Townsend, 1912 |
| Peromyscus eremicus subsp. cedrosensis J. A. Allen, 1898 |
| Peromyscus eremicus subsp. cinereus Hall, 1931 |
| Peromyscus eremicus subsp. collatus Burt, 1932 |
| Peromyscus eremicus subsp. eremicus (Baird, 1858) |
| Peromyscus eremicus subsp. eva Thomas, 1898 |
| Peromyscus eremicus subsp. fraterculus (G. S. Miller, 1892) |
| Peromyscus eremicus subsp. insulicola Osgood, 1909 |
| Peromyscus eremicus subsp. interparietalis Burt, 1932 |
| Peromyscus eremicus subsp. lorenzi Banks, 1967 |
| Peromyscus eremicus subsp. papagensis Goldman, 1917 |
| Peromyscus eremicus subsp. phaeurus Osgood, 1904 |
| Peromyscus eremicus subsp. polypolius Osgood, 1909 |
| Peromyscus eremicus subsp. propinquus J. A. Allen, 1898 |