| Peromyscus lophurus Osgood, 1904 |
| Peromyscus madrensis Merriam, 1898 |
| Peromyscus maniculatus (Wagner, 1845) |
| Peromyscus maniculatus subsp. assimilis E. W. Nelson & Goldman, 1931 |
| Peromyscus maniculatus subsp. blandus Osgood, 1904 |
| Peromyscus maniculatus subsp. cineritius J. A. Allen, 1898 |
| Peromyscus maniculatus subsp. coolidgei Thomas, 1898 |
| Peromyscus maniculatus subsp. dorsalis E. W. Nelson & Goldman, 1931 |
| Peromyscus maniculatus subsp. dubius J. A. Allen, 1898 |
| Peromyscus maniculatus subsp. exiguus J. A. Allen, 1898 |
| Peromyscus maniculatus subsp. fulvus Osgood, 1904 |
| Peromyscus maniculatus subsp. gambelii (Baird, 1858) |
| Peromyscus maniculatus subsp. geronimensis J. A. Allen, 1898 |
| Peromyscus maniculatus subsp. hueyi E. W. Nelson & Goldman, 1932 |
| Peromyscus maniculatus subsp. labecula Elliot, 1903 |
| Peromyscus maniculatus subsp. magdalenae Osgood, 1909 |
| Peromyscus maniculatus subsp. margaritae Osgood, 1909 |
| Peromyscus maniculatus subsp. martinensis E. W. Nelson & Goldman, 1931 |
| Peromyscus maniculatus subsp. rufinus (Merriam, 1890) |
| Peromyscus maniculatus subsp. sonoriensis (LeConte, 1853) |